eLxr packages [ bianca ]
[ Источник: miniasm ]
Пакет: miniasm (0.3+dfsg-4)
Ссылки для miniasm
Исходный код miniasm:
Сопровождающие:
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
ultrafast de novo assembler for long noisy DNA sequencing reads
Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
Другие пакеты, относящиеся к miniasm
|
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
-
- rec: minimap
- tool for approximate mapping of long biosequences such as DNA reads
Загрузка miniasm
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 29,2 Кб | 71,0 Кб | [список файлов] |