Paket: skewer (0.2.2-6 och andra)

Länkar för skewer

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Hämta källkodspaketet skewer:

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Externa resurser:

Hemsida [github.com]

Liknande paket:

post-processing of high-throughput DNA sequence reads

skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.

Features

 * Detection and removal of adapter sequences
 * Insertion and deletion allowed in pattern matching
 * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
 * Demultiplexing of barcoded sequencing runs
 * Multi-threading support
 * Trimming based on phred quality scores
 * IUPAC characters for barcodes and adapters
 * Compressed input and output support

Andra paket besläktade med skewer

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.34) [amd64]

GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb

dep: libc6 (>= 2.38) [arm64]
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3

Hämta skewer

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	0.2.2-6+b1	86,4 kbyte	216,0 kbyte	[filförteckning]
arm64	0.2.2-6+b2	79,1 kbyte	236,0 kbyte	[filförteckning]