[ bianca ]
[ aria ]
[ Source: ariba ]
Пакунок: ariba (2.14.6+ds-5 and others)
Links for ariba
Download Source Package ariba:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
Antibiotic Resistance Identification By Assembly
ARIBA is a tool that identifies antibiotic resistance genes by running local assemblies. The input is a FASTA file of reference genes and paired sequencing reads. ARIBA reports which of the reference genes were found, plus detailed information on the quality of the assemblies and any variants between the sequencing reads and the reference genes.
Інші пакунки пов'язані з ariba
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: fastaq
- Пакунок недоступний
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libfml0 (>= 0.1)
- Пакунок недоступний
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libminimap0 (>= 0.2)
- Пакунок недоступний
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: mash
- Пакунок недоступний
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- dep: mummer
- Пакунок недоступний
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.12)
- dep: python3 (>= 3.11~)
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- dep: python3-biopython
- Пакунок недоступний
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- dep: python3-bs4
- error-tolerant HTML parser for Python 3
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- dep: python3-dendropy
- Пакунок недоступний
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- dep: python3-pymummer
- Пакунок недоступний
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- dep: python3-pysam
- Пакунок недоступний
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- dep: python3-tk
- Tkinter - Writing Tk applications with Python 3.x
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- sug: spades
- Пакунок недоступний
Завантажити ariba
| Архітектура | Версія | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|---|
| amd64 | 2.14.6+ds-5+b1 | 1,909.9 kB | 20,451.0 kB | [список файлів] |