eLxr packages [ bianca ]
[ Bron: megadepth ]
Pakket: megadepth (1.2.0-4 en anderen)
Verwijzigingen voor megadepth
Het bronpakket megadepth downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
Andere aan megadepth gerelateerde pakketten
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- dep: libbigwig0t64 (>= 0.4.6)
- C library for handling bigWig files
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- dep: libc6 (>= 2.34) [amd64]
- GNU C Library: Shared libraries
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.38) [arm64]
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities