Пакунок: megadepth (1.2.0-4 and others)

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computes coverage from BigWig and BAM sequencing files

A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.

This package is a successor of the program 'bamcount'.

Інші пакунки пов'язані з megadepth

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recommends

suggests

enhances

dep: libbigwig0t64 (>= 0.4.6)

C library for handling bigWig files
dep: libc6 (>= 2.34) [amd64]

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.38) [arm64]
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libhts3t64 (>= 1.17)

C library for high-throughput sequencing data formats
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3

sug: r-bioc-megadepth

BioCOnductor BigWig and BAM related utilities

Завантажити megadepth

Завантаження для всіх доступних архітектур
Архітектура	Версія	Розмір пакунка	Розмір після встановлення	Файли
amd64	1.2.0-4+b1	81.0 kB	275.0 kB	[список файлів]
arm64	1.2.0-4+b2	72.4 kB	275.0 kB	[список файлів]