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[ Quellcode: megadepth ]
Paket: megadepth (1.2.0-4 und andere)
Links für megadepth
Quellcode-Paket megadepth herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
Andere Pakete mit Bezug zu megadepth
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- dep: libbigwig0t64 (>= 0.4.6)
- C library for handling bigWig files
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- dep: libc6 (>= 2.34) [amd64]
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
- dep: libc6 (>= 2.38) [arm64]
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities
megadepth herunterladen
| Architektur | Version | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|---|
| amd64 | 1.2.0-4+b1 | 81,0 kB | 275,0 kB | [Liste der Dateien] |
| arm64 | 1.2.0-4+b2 | 72,4 kB | 275,0 kB | [Liste der Dateien] |