eLxr packages [ bianca ]
[ Bron: ampliconnoise ]
Pakket: ampliconnoise (1.29-15 en anderen)
Verwijzigingen voor ampliconnoise
Het bronpakket ampliconnoise downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Andere aan ampliconnoise gerelateerde pakketten
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
Ook een virtueel pakket geboden door: libc6-udeb
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- dep: libgsl28 (>= 2.8+dfsg)
- GNU Scientific Library (GSL) -- library package
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- dep: libopenmpi40 (>= 5.0.6)
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: mpi-default-bin
- Standard MPI runtime programs (metapackage)