eLxr packages [ bianca ]
[ Pakiet źródłowy: pizzly ]
Pakiet: pizzly (0.37.3+ds-9 i inne)
Odnośniki dla pizzly
Pobieranie pakietu źródłowego pizzly:
Opiekunowie:
Zasoby zewnętrzne:
- Strona internetowa [github.com]
Podobne pakiety:
Identifies gene fusions in RNA sequencing data
For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.
Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.
Inne pakiety związane z pizzly
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- dep: kallisto
- near-optimal RNA-Seq quantification
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- dep: libc6 (>= 2.34) [amd64]
- GNU C Library: Shared libraries
również pakiet wirtualny udostępniany przez libc6-udeb
- dep: libc6 (>= 2.38) [arm64]
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 12) [amd64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 13.1) [arm64]
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: python3-h5py
- general-purpose Python interface to hdf5
Pobieranie pizzly
| Architektura | Wersja | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
|---|---|---|---|---|
| amd64 | 0.37.3+ds-9 | 285,5 KiB | 864,0 KiB | [lista plików] |
| arm64 | 0.37.3+ds-9+b2 | 262,0 KiB | 929,0 KiB | [lista plików] |